<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE article PUBLIC "-//NLM//DTD JATS (Z39.96) Journal Publishing DTD v1.3 20210610//EN" "JATS-journalpublishing1-3.dtd">
<article article-type="research-article" dtd-version="1.3" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xml:lang="ru"><front><journal-meta><journal-id journal-id-type="publisher-id">medalphabet</journal-id><journal-title-group><journal-title xml:lang="ru">Медицинский алфавит</journal-title><trans-title-group xml:lang="en"><trans-title>Medical alphabet</trans-title></trans-title-group></journal-title-group><issn pub-type="ppub">2078-5631</issn><issn pub-type="epub">2949-2807</issn><publisher><publisher-name>ООО «Альфмед»</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="doi">10.33667/2078-5631-2023-9-51-56</article-id><article-id custom-type="elpub" pub-id-type="custom">medalphabet-3139</article-id><article-categories><subj-group subj-group-type="heading"><subject>Research Article</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="ru"><subject>Статьи</subject></subj-group></article-categories><title-group><article-title>Роль микробиома в развитии ревматоидного артрита и возможные методы его коррекции</article-title><trans-title-group xml:lang="en"><trans-title>Role of microbioma in rheumatoid arthritis and possible methods of its correction</trans-title></trans-title-group></title-group><contrib-group><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0001-5127-611X</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Спицина</surname><given-names>С. С.</given-names></name><name name-style="western" xml:lang="en"><surname>Spitsina</surname><given-names>S. S.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Спицина Светлана Сергеевна, м. н. с., ФГБНУ «Научно-исследовательский институт клинической и экспериментальной ревматологии имени А. Б. Зборовского»; ассистент кафедры госпитальнойтерапии, ВПТ, ФГБОУ ВО «Волгоградский государственный медицинский университет» Минздрава России</p><p>Волгоград</p></bio><bio xml:lang="en"><p>Spitsina Svetlana S., junior researcher, Research Institute for Clinical and Experimental Rheumatology n. a. A. B. Zborovsky, Volgograd; assistant at Dept of Hospital Therapy, MFT, Volgograd State Medical University</p><p>Volgograd</p></bio><email xlink:type="simple">ssspitsina@mail.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Тинаева</surname><given-names>Р. Ш.</given-names></name><name name-style="western" xml:lang="en"><surname>Tinaeva</surname><given-names>R. Sh.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Тинаева Риана Шамильевна, студент</p><p>Волгоград</p></bio><bio xml:lang="en"><p>Tinaeva Riana Sh., student</p><p>Volgograd</p></bio><xref ref-type="aff" rid="aff-2"/></contrib></contrib-group><aff-alternatives id="aff-1"><aff xml:lang="ru"><institution>ФГБНУ «Научно-исследовательский институт клинической и экспериментальной ревматологии имени А. Б. Зборовского»; ФГБОУ ВО «Волгоградский государственный медицинский университет» Минздрава России</institution><country>Россия</country></aff><aff xml:lang="en"><institution>Research Institute for Clinical and Experimental Rheumatology n. a. A. B. Zborovsky, Volgograd; Volgograd State Medical University</institution><country>Russian Federation</country></aff></aff-alternatives><aff-alternatives id="aff-2"><aff xml:lang="ru"><institution>ФГБОУ ВО «Волгоградский государственный медицинский университет» Минздрава России</institution><country>Россия</country></aff><aff xml:lang="en"><institution>Volgograd State Medical University</institution><country>Russian Federation</country></aff></aff-alternatives><pub-date pub-type="collection"><year>2023</year></pub-date><pub-date pub-type="epub"><day>23</day><month>06</month><year>2023</year></pub-date><volume>0</volume><issue>9</issue><issue-title>Ревматология в общей врачебной практике (1)</issue-title><fpage>51</fpage><lpage>56</lpage><permissions><copyright-statement>Copyright &amp;#x00A9; Спицина С.С., Тинаева Р.Ш., 2023</copyright-statement><copyright-year>2023</copyright-year><copyright-holder xml:lang="ru">Спицина С.С., Тинаева Р.Ш.</copyright-holder><copyright-holder xml:lang="en">Spitsina S.S., Tinaeva R.S.</copyright-holder><license xml:lang="ru" license-type="creative-commons-attribution" xlink:href="https://creativecommons.org/licenses/by/4.0/" xlink:type="simple"><license-p>Данная работа распространяется под лицензией Creative Commons Attribution 4.0.</license-p></license><license xml:lang="en" license-type="creative-commons-attribution" xlink:href="https://creativecommons.org/licenses/by/4.0/" xlink:type="simple"><license-p>This work is licensed under a Creative Commons Attribution 4.0 License.</license-p></license></permissions><self-uri xlink:href="https://www.med-alphabet.com/jour/article/view/3139">https://www.med-alphabet.com/jour/article/view/3139</self-uri><abstract><p>Организм человека густонаселен комменсальными и симбиотическими микроорганизмами, геном и экосистемы которых составляют микробиом, присутствие которого регулирует развитие и функцию иммунной системы человека. Кроме того, комменсальные микроорганизмы влияют и на другие физиологические процессы метаболизма хозяина. В последнее время многие ученые акцентируют внимание на важности микробиома в патогенезе ряда заболеваний, в том числе аутоиммунных. Дисбиоз может неблагоприятно влиять на иммунную систему как локально, так и системно, тем самым предрасполагая к некоторым патологиям, включая ревматоидный артрит (РА), при котором уже на ранних стадиях микробиом отличается от такового у здоровых людей. Целью данного обзора является изучение исследований, связывающих изменения микробиома с аутоиммунными механизмами, участвующими в патогенезе РА, и рассмотрение возможных методов их коррекции.</p></abstract><trans-abstract xml:lang="en"><p>The human body is densely populated by commensal and symbiotic microorganisms whose genome and ecosystems constitute the microbiome whose presence regulates the development and function of the human immune system. In addition, commensal microorganisms inﬂuence other physiological processes of the host metabolism. Recently, many scientists have emphasized the importance of the microbiome in the pathogenesis of several diseases, including autoimmune diseases. Dysbiosis can adversely affect the immune system both locally and systemically, thereby predisposing to certain pathologies, including rheumatoid arthritis (RA); in which the microbiome already in its early stages differs from that of healthy individuals. The purpose of this review is to examine the studies linking microbiome changes with autoimmune mechanisms involved in the pathogenesis of RA and to consider possible methods of their correction.</p></trans-abstract><kwd-group xml:lang="ru"><kwd>ревматоидный артрит</kwd><kwd>микробиом</kwd><kwd>микробиота ротовой полости</kwd><kwd>микробиота кишечника</kwd><kwd>микробиота легких</kwd><kwd>аутоиммунное воспаление</kwd></kwd-group><kwd-group xml:lang="en"><kwd>rheumatoid arthritis</kwd><kwd>microbiome</kwd><kwd>oral microbiota</kwd><kwd>gut microbiota</kwd><kwd>lung microbiota</kwd><kwd>autoimmune inflammation</kwd></kwd-group></article-meta></front><back><ref-list><title>References</title><ref id="cit1"><label>1</label><citation-alternatives><mixed-citation xml:lang="ru">Smolen JS, Aletaha D, Barton A, Burmester GR, Emery P, Firestein GS, Kavanaugh A, McInnes IB, Solomon DH, Strand V, Yamamoto K. Rheumatoid arthritis. Nat Rev Dis Primers. 2018 Feb 8; 4: 18001. https://doi.org/10.1038/nrdp.2018.1</mixed-citation><mixed-citation xml:lang="en">Smolen JS, Aletaha D, Barton A, Burmester GR, Emery P, Firestein GS, Kavanaugh A, McInnes IB, Solomon DH, Strand V, Yamamoto K. Rheumatoid arthritis. Nat Rev Dis Primers. 2018 Feb 8; 4: 18001. https://doi.org/10.1038/nrdp.2018.1</mixed-citation></citation-alternatives></ref><ref id="cit2"><label>2</label><citation-alternatives><mixed-citation xml:lang="ru">Aletaha D, Ramiro S. Diagnosis and Management of Rheumatoid Arthritis. JAMA. 2018; 320: 1360–1372.</mixed-citation><mixed-citation xml:lang="en">Aletaha D, Ramiro S. Diagnosis and Management of Rheumatoid Arthritis. JAMA. 2018; 320: 1360–1372.</mixed-citation></citation-alternatives></ref><ref id="cit3"><label>3</label><citation-alternatives><mixed-citation xml:lang="ru">Scott DL, Wolfe F, Huizinga TW. Rheumatoid arthritis. Lancet. 2010 Sep 25; 376 (9746): 1094–108. https://doi.org/10.1016/S0140–6736(10)60826–4</mixed-citation><mixed-citation xml:lang="en">Scott DL, Wolfe F, Huizinga TW. Rheumatoid arthritis. Lancet. 2010 Sep 25; 376 (9746): 1094–108. https://doi.org/10.1016/S0140–6736(10)60826–4</mixed-citation></citation-alternatives></ref><ref id="cit4"><label>4</label><citation-alternatives><mixed-citation xml:lang="ru">Weyand CM, Goronzy JJ. The immunology of rheumatoid arthritis. Nat Immunol. 2021 Jan; 22 (1): 10–18. https://doi.org/10.1038/s41590–020–00816-x</mixed-citation><mixed-citation xml:lang="en">Weyand CM, Goronzy JJ. The immunology of rheumatoid arthritis. Nat Immunol. 2021 Jan; 22 (1): 10–18. https://doi.org/10.1038/s41590–020–00816-x</mixed-citation></citation-alternatives></ref><ref id="cit5"><label>5</label><citation-alternatives><mixed-citation xml:lang="ru">Hansildaar R, Vedder D, Baniaamam M, Tausche AK, Gerritsen M, Nurmohamed MT. Cardiovascular risk in inﬂammatory arthritis: Rheumatoid arthritis and gout. Lancet Rheumatol. 2021 Jan; 3 (1): e58–e70. https://doi.org/10.1016/S2665–9913(20)30221–6</mixed-citation><mixed-citation xml:lang="en">Hansildaar R, Vedder D, Baniaamam M, Tausche AK, Gerritsen M, Nurmohamed MT. Cardiovascular risk in inﬂammatory arthritis: Rheumatoid arthritis and gout. Lancet Rheumatol. 2021 Jan; 3 (1): e58–e70. https://doi.org/10.1016/S2665–9913(20)30221–6</mixed-citation></citation-alternatives></ref><ref id="cit6"><label>6</label><citation-alternatives><mixed-citation xml:lang="ru">Nerurkar L, Siebert S, McInnes IB, Cavanagh J. Rheumatoid arthritis and depression: An inﬂammatory perspective. Lancet Psychiatry. 2019 Feb; 6 (2): 164–173. https://doi.org/10.1016/S2215–0366(18)30255–4</mixed-citation><mixed-citation xml:lang="en">Nerurkar L, Siebert S, McInnes IB, Cavanagh J. Rheumatoid arthritis and depression: An inﬂammatory perspective. Lancet Psychiatry. 2019 Feb; 6 (2): 164–173. https://doi.org/10.1016/S2215–0366(18)30255–4</mixed-citation></citation-alternatives></ref><ref id="cit7"><label>7</label><citation-alternatives><mixed-citation xml:lang="ru">Plant D, Wilson AG, Barton A. Genetic and epigenetic predictors of responsiveness to treatment in RA. Nat Rev Rheumatol. 2014; 10 (6): 329–337. https://doi.org/10.1038/nrrheum.2014.16</mixed-citation><mixed-citation xml:lang="en">Plant D, Wilson AG, Barton A. Genetic and epigenetic predictors of responsiveness to treatment in RA. Nat Rev Rheumatol. 2014; 10 (6): 329–337. https://doi.org/10.1038/nrrheum.2014.16</mixed-citation></citation-alternatives></ref><ref id="cit8"><label>8</label><citation-alternatives><mixed-citation xml:lang="ru">Littlejohn EA, Monrad S. Early Diagnosis and Treatment of Rheumatoid Arthritis. Prim. Care: Clin. Off. Pr. 2018; 45: 237–255. https://doi.org/10.1016/j.pop.2018.02.010</mixed-citation><mixed-citation xml:lang="en">Littlejohn EA, Monrad S. Early Diagnosis and Treatment of Rheumatoid Arthritis. Prim. Care: Clin. Off. Pr. 2018; 45: 237–255. https://doi.org/10.1016/j.pop.2018.02.010</mixed-citation></citation-alternatives></ref><ref id="cit9"><label>9</label><citation-alternatives><mixed-citation xml:lang="ru">Hacquard S, et al. Microbiota and host nutrition across plant and animal kingdoms. Cell Host Microbe. 2015; 17: 603–616. https://doi.org/10.1016/j.chom.2015.04.009</mixed-citation><mixed-citation xml:lang="en">Hacquard S, et al. Microbiota and host nutrition across plant and animal kingdoms. Cell Host Microbe. 2015; 17: 603–616. https://doi.org/10.1016/j.chom.2015.04.009</mixed-citation></citation-alternatives></ref><ref id="cit10"><label>10</label><citation-alternatives><mixed-citation xml:lang="ru">Lynch JB, Hsiao EY. Microbiomes as sources of emergent host phenotypes. Science. 2019; 365: 1405–1409. https://doi.org/10.1126/science.aay0240</mixed-citation><mixed-citation xml:lang="en">Lynch JB, Hsiao EY. Microbiomes as sources of emergent host phenotypes. Science. 2019; 365: 1405–1409. https://doi.org/10.1126/science.aay0240</mixed-citation></citation-alternatives></ref><ref id="cit11"><label>11</label><citation-alternatives><mixed-citation xml:lang="ru">Gopalakrishnan V, Helmink BA, Spencer CN, Reuben A, Wargo JA. The inﬂuence of the gut microbiome on cancer, immunity, and cancer immunotherapy. Cancer Cell. 2018; 33: 570–580. https://doi.org/10.1016/j.ccell.2018.03.015</mixed-citation><mixed-citation xml:lang="en">Gopalakrishnan V, Helmink BA, Spencer CN, Reuben A, Wargo JA. The inﬂuence of the gut microbiome on cancer, immunity, and cancer immunotherapy. Cancer Cell. 2018; 33: 570–580. https://doi.org/10.1016/j.ccell.2018.03.015</mixed-citation></citation-alternatives></ref><ref id="cit12"><label>12</label><citation-alternatives><mixed-citation xml:lang="ru">Maeda Y, Takeda K. Host-microbiota interactions in rheumatoid arthritis. Exp. Mol. Med. 2019; 51: 1–6. https://doi.org/10.1038/s12276–019–0283–6</mixed-citation><mixed-citation xml:lang="en">Maeda Y, Takeda K. Host-microbiota interactions in rheumatoid arthritis. Exp. Mol. Med. 2019; 51: 1–6. https://doi.org/10.1038/s12276–019–0283–6</mixed-citation></citation-alternatives></ref><ref id="cit13"><label>13</label><citation-alternatives><mixed-citation xml:lang="ru">Main BS, Minter MR. Microbial immuno-communication in neurodegenerative diseases. Front. Neurosci. 2017; 11: 151. https://doi.org/10.3389/fnins.2017.00151</mixed-citation><mixed-citation xml:lang="en">Main BS, Minter MR. Microbial immuno-communication in neurodegenerative diseases. Front. Neurosci. 2017; 11: 151. https://doi.org/10.3389/fnins.2017.00151</mixed-citation></citation-alternatives></ref><ref id="cit14"><label>14</label><citation-alternatives><mixed-citation xml:lang="ru">Kundu P, Blacher E, Elinav E, Pettersson S. Our Gut Microbiome: The Evolving Inner Self. Cell. 2017; 171 (7): 1481–1493. https://doi.org/10.1016/j.cell.2017.11.024</mixed-citation><mixed-citation xml:lang="en">Kundu P, Blacher E, Elinav E, Pettersson S. Our Gut Microbiome: The Evolving Inner Self. Cell. 2017; 171 (7): 1481–1493. https://doi.org/10.1016/j.cell.2017.11.024</mixed-citation></citation-alternatives></ref><ref id="cit15"><label>15</label><citation-alternatives><mixed-citation xml:lang="ru">Helmink BA, Khan MAW, Hermann A, Gopalakrishnan V, Wargo JA. The microbiome, cancer, and cancer therapy. Nat Med. 2019; 25 (3): 377–388. https://doi.org/10.1038/s41591–019–0377–7</mixed-citation><mixed-citation xml:lang="en">Helmink BA, Khan MAW, Hermann A, Gopalakrishnan V, Wargo JA. The microbiome, cancer, and cancer therapy. Nat Med. 2019; 25 (3): 377–388. https://doi.org/10.1038/s41591–019–0377–7</mixed-citation></citation-alternatives></ref><ref id="cit16"><label>16</label><citation-alternatives><mixed-citation xml:lang="ru">Samriz O, Mizrahi H, Werbner M, Shoenfeld Y, Avni O, Koren O. Microbiota at the crossroads of autoimmunity. Autoimmun Revi. 2016; 15: 859–869. https://doi.org/10.1016/j.autrev.2016.07.012</mixed-citation><mixed-citation xml:lang="en">Samriz O, Mizrahi H, Werbner M, Shoenfeld Y, Avni O, Koren O. Microbiota at the crossroads of autoimmunity. Autoimmun Revi. 2016; 15: 859–869. https://doi.org/10.1016/j.autrev.2016.07.012</mixed-citation></citation-alternatives></ref><ref id="cit17"><label>17</label><citation-alternatives><mixed-citation xml:lang="ru">Rinaldi M, Perricone R, Blank M, Perricone C, Shoenfeld Y. Anti-Saccharomyces cerevisiae autoantibodies in autoimmune diseases: from bread baking to autoimmunity. Clin Rev Allerg Immunol. 2013; 45: 152–161. https://doi.org/10.1007/s12016–012–8344–9</mixed-citation><mixed-citation xml:lang="en">Rinaldi M, Perricone R, Blank M, Perricone C, Shoenfeld Y. Anti-Saccharomyces cerevisiae autoantibodies in autoimmune diseases: from bread baking to autoimmunity. Clin Rev Allerg Immunol. 2013; 45: 152–161. https://doi.org/10.1007/s12016–012–8344–9</mixed-citation></citation-alternatives></ref><ref id="cit18"><label>18</label><citation-alternatives><mixed-citation xml:lang="ru">Shoenfeld Y, Agmon-Levin N. ASIA – autoimmune/inﬂammatory syndrome induced by adjuvants. J Autoimmun. 2011; 36: 4–8. https://doi.org/10.1016/j.jaut.2010.07.003</mixed-citation><mixed-citation xml:lang="en">Shoenfeld Y, Agmon-Levin N. ASIA – autoimmune/inﬂammatory syndrome induced by adjuvants. J Autoimmun. 2011; 36: 4–8. https://doi.org/10.1016/j.jaut.2010.07.003</mixed-citation></citation-alternatives></ref><ref id="cit19"><label>19</label><citation-alternatives><mixed-citation xml:lang="ru">Marietta E, Horwath I, Balakrishnan B, Taneja V. Role of the intestinal microbiome in autoimmune diseases and its use in treatments. Cell Immunol. 2019; 339: 50–58. https://doi.org/10.1016/j.cellimm.2018.10.005</mixed-citation><mixed-citation xml:lang="en">Marietta E, Horwath I, Balakrishnan B, Taneja V. Role of the intestinal microbiome in autoimmune diseases and its use in treatments. Cell Immunol. 2019; 339: 50–58. https://doi.org/10.1016/j.cellimm.2018.10.005</mixed-citation></citation-alternatives></ref><ref id="cit20"><label>20</label><citation-alternatives><mixed-citation xml:lang="ru">Dissick A, Redman RS, Jones M, Rangan BV, Reimold A, Grifﬁths GR, Mikuls TR, Amdur RL, Richards JS, Kerr GS. Association of periodontitis with rheumatoid arthritis: A pilot study. J Periodontol. 2010; 81 (2): 223–230. https://doi.org/10.1902/jop.2009.090309</mixed-citation><mixed-citation xml:lang="en">Dissick A, Redman RS, Jones M, Rangan BV, Reimold A, Grifﬁths GR, Mikuls TR, Amdur RL, Richards JS, Kerr GS. Association of periodontitis with rheumatoid arthritis: A pilot study. J Periodontol. 2010; 81 (2): 223–230. https://doi.org/10.1902/jop.2009.090309</mixed-citation></citation-alternatives></ref><ref id="cit21"><label>21</label><citation-alternatives><mixed-citation xml:lang="ru">Ortiz P, Bissada NF, Palomo L, Han YW, Al-Zahrani MS, Panneerselvam A, Askari A. Periodontal therapy reduces the severity of active rheumatoid arthritis in patients treated with or without tumor necrosis factor inhibitors. J Periodontol. 2009; 80 (4): 535–540.</mixed-citation><mixed-citation xml:lang="en">Ortiz P, Bissada NF, Palomo L, Han YW, Al-Zahrani MS, Panneerselvam A, Askari A. Periodontal therapy reduces the severity of active rheumatoid arthritis in patients treated with or without tumor necrosis factor inhibitors. J Periodontol. 2009; 80 (4): 535–540.</mixed-citation></citation-alternatives></ref><ref id="cit22"><label>22</label><citation-alternatives><mixed-citation xml:lang="ru">Farquharson D, Butcher JP, Culshaw S. Periodontitis, porphyromonas, and the pathogenesis of rheumatoid arthritis. Mucosal Immunol. 2012; 5: 112–120. https://doi.org/10.1038/mi.2011.66</mixed-citation><mixed-citation xml:lang="en">Farquharson D, Butcher JP, Culshaw S. Periodontitis, porphyromonas, and the pathogenesis of rheumatoid arthritis. Mucosal Immunol. 2012; 5: 112–120. https://doi.org/10.1038/mi.2011.66</mixed-citation></citation-alternatives></ref><ref id="cit23"><label>23</label><citation-alternatives><mixed-citation xml:lang="ru">Mikuls TR, Payne JB, Yu F, Thiele GM, Reynolds RJ, Cannon GW, Markt J, McGowan D, Kerr GS, Redman RS, Reimold A, Grifﬁths G, Beatty M, Gonzalez SM, Bergman DA, Hamilton BC3rd, Erickson AR, Sokolove J, Robinson WH, Walker C, Chandad F, O'Dell JR. Periodontitis and Porphyromonas gingivalis in patients with rheumatoid arthritis. Arthritis Rheumatol. 2014; 66 (5): 1090–1100. https://doi.org/10.1002/art.38348.</mixed-citation><mixed-citation xml:lang="en">Mikuls TR, Payne JB, Yu F, Thiele GM, Reynolds RJ, Cannon GW, Markt J, McGowan D, Kerr GS, Redman RS, Reimold A, Grifﬁths G, Beatty M, Gonzalez SM, Bergman DA, Hamilton BC3rd, Erickson AR, Sokolove J, Robinson WH, Walker C, Chandad F, O'Dell JR. Periodontitis and Porphyromonas gingivalis in patients with rheumatoid arthritis. Arthritis Rheumatol. 2014; 66 (5): 1090–1100. https://doi.org/10.1002/art.38348.</mixed-citation></citation-alternatives></ref><ref id="cit24"><label>24</label><citation-alternatives><mixed-citation xml:lang="ru">Quirke AM, Lugli EB, Wegner N, Hamilton BC, Charles P, Chowdhury M, Ytterberg AJ, Zubarev RA, Potempa J, Culshaw S, Guo Y, Fisher BA, Thiele G, Mikuls TR, Venables PJ. Heightened immune response to autocitrullinated Porphyromonas gingivalis peptidylarginine deiminase: a potential mechanism for breaching immunologic tolerance in rheumatoid arthritis. Ann Rheum Dis. 2014; 73 (1): 263–269. https://doi.org/10.1136/annrheumdis-2012–202726</mixed-citation><mixed-citation xml:lang="en">Quirke AM, Lugli EB, Wegner N, Hamilton BC, Charles P, Chowdhury M, Ytterberg AJ, Zubarev RA, Potempa J, Culshaw S, Guo Y, Fisher BA, Thiele G, Mikuls TR, Venables PJ. Heightened immune response to autocitrullinated Porphyromonas gingivalis peptidylarginine deiminase: a potential mechanism for breaching immunologic tolerance in rheumatoid arthritis. Ann Rheum Dis. 2014; 73 (1): 263–269. https://doi.org/10.1136/annrheumdis-2012–202726</mixed-citation></citation-alternatives></ref><ref id="cit25"><label>25</label><citation-alternatives><mixed-citation xml:lang="ru">Wegner N, Wait R, Sroka A, Eick S, Nguyen K-A, Lundberg K, Kinloch AJ, Culshaw S, Potempa J, Venables PJ. Peptidylarginine deiminase from Porphyromonas gingivalis citrullinates human ﬁbrinogen and α-enolase: Implications for autoimmunity in rheumatoid arthritis. Arthritis Rheum. 2010; 62: 2662–2672. https://doi.org/10.1002/art.27552</mixed-citation><mixed-citation xml:lang="en">Wegner N, Wait R, Sroka A, Eick S, Nguyen K-A, Lundberg K, Kinloch AJ, Culshaw S, Potempa J, Venables PJ. Peptidylarginine deiminase from Porphyromonas gingivalis citrullinates human ﬁbrinogen and α-enolase: Implications for autoimmunity in rheumatoid arthritis. Arthritis Rheum. 2010; 62: 2662–2672. https://doi.org/10.1002/art.27552</mixed-citation></citation-alternatives></ref><ref id="cit26"><label>26</label><citation-alternatives><mixed-citation xml:lang="ru">Konig MF, Abusleme L, Reinholdt J, Palmer RJ, Teles RP, Sampson K, Rosen A, Nigrovic PA, Sokolove J, Giles JT, Moutsopoulos NM, Andrade F. Aggregatibacter actinomycetemcomitans-induced hypercitrullination links periodontal infection to autoimmunity in rheumatoid arthritis. Sci Transl Med. 2016; 8 (369). https://doi.org/10.1126/scitranslmed.aaj1921</mixed-citation><mixed-citation xml:lang="en">Konig MF, Abusleme L, Reinholdt J, Palmer RJ, Teles RP, Sampson K, Rosen A, Nigrovic PA, Sokolove J, Giles JT, Moutsopoulos NM, Andrade F. Aggregatibacter actinomycetemcomitans-induced hypercitrullination links periodontal infection to autoimmunity in rheumatoid arthritis. Sci Transl Med. 2016; 8 (369). https://doi.org/10.1126/scitranslmed.aaj1921</mixed-citation></citation-alternatives></ref><ref id="cit27"><label>27</label><citation-alternatives><mixed-citation xml:lang="ru">Caminer AC, Haberman R, Scher JU. Human microbiome, infections, and rheumatic disease. Clin Rheumatol. 2017; 36: 2645–2653. https://doi.org/10.1007/s10067–017–3875–3.</mixed-citation><mixed-citation xml:lang="en">Caminer AC, Haberman R, Scher JU. Human microbiome, infections, and rheumatic disease. Clin Rheumatol. 2017; 36: 2645–2653. https://doi.org/10.1007/s10067–017–3875–3.</mixed-citation></citation-alternatives></ref><ref id="cit28"><label>28</label><citation-alternatives><mixed-citation xml:lang="ru">Alpizar-Rodriguez D, Lesker TR, Gronow A, Gilbert B, Raemy E, Lamacchia C, Gabay C, Finckh A, Strowig T. Prevotella copri in individuals at risk for rheumatoid arthritis. Ann Rheum Dis. 2019; 78 (5): 590–593. https://doi.org/10.1136/annrheumdis-2018–214514</mixed-citation><mixed-citation xml:lang="en">Alpizar-Rodriguez D, Lesker TR, Gronow A, Gilbert B, Raemy E, Lamacchia C, Gabay C, Finckh A, Strowig T. Prevotella copri in individuals at risk for rheumatoid arthritis. Ann Rheum Dis. 2019; 78 (5): 590–593. https://doi.org/10.1136/annrheumdis-2018–214514</mixed-citation></citation-alternatives></ref><ref id="cit29"><label>29</label><citation-alternatives><mixed-citation xml:lang="ru">Moreno J, et al. Prevotella copri and the microbial pathogenesis of rheumatoid arthritis. Reumatol Clin. 2015; 11: 61–63. https://doi.org/10.1016/j.reuma.2014.11.001</mixed-citation><mixed-citation xml:lang="en">Moreno J, et al. Prevotella copri and the microbial pathogenesis of rheumatoid arthritis. Reumatol Clin. 2015; 11: 61–63. https://doi.org/10.1016/j.reuma.2014.11.001</mixed-citation></citation-alternatives></ref><ref id="cit30"><label>30</label><citation-alternatives><mixed-citation xml:lang="ru">Chen J, Wright K, Davis JM, Jeraldo P, Marietta EV, Murray J, Nelson H, Matteson EL, Taneja V. An expansion of rare lineage intestinal microbes characterizes rheumatoid arthritis. Genome Med. 2016; 8 (1): 43. https://doi.org/10.1186/s13073–016–0299–7</mixed-citation><mixed-citation xml:lang="en">Chen J, Wright K, Davis JM, Jeraldo P, Marietta EV, Murray J, Nelson H, Matteson EL, Taneja V. An expansion of rare lineage intestinal microbes characterizes rheumatoid arthritis. Genome Med. 2016; 8 (1): 43. https://doi.org/10.1186/s13073–016–0299–7</mixed-citation></citation-alternatives></ref><ref id="cit31"><label>31</label><citation-alternatives><mixed-citation xml:lang="ru">Scher JU, Joshua V, Artacho A, et al. The lung microbiota in early rheumatoid arthritis and autoimmunity. Microbiome. 2016; 4 (1): 60. https://doi.org/10.1186/s40168–016–0206-x</mixed-citation><mixed-citation xml:lang="en">Scher JU, Joshua V, Artacho A, et al. The lung microbiota in early rheumatoid arthritis and autoimmunity. Microbiome. 2016; 4 (1): 60. https://doi.org/10.1186/s40168–016–0206-x</mixed-citation></citation-alternatives></ref><ref id="cit32"><label>32</label><citation-alternatives><mixed-citation xml:lang="ru">Rogier R, Evans-Marin H, Manasson J, et al. Alteration of the intestinal microbiome characterizes preclinical inﬂammatory arthritis in mice and its modulation attenuates established arthritis. Sci Rep. 2017; 7 (1): 15613. https://doi.org/10.1038/s41598–017–15802-x</mixed-citation><mixed-citation xml:lang="en">Rogier R, Evans-Marin H, Manasson J, et al. Alteration of the intestinal microbiome characterizes preclinical inﬂammatory arthritis in mice and its modulation attenuates established arthritis. Sci Rep. 2017; 7 (1): 15613. https://doi.org/10.1038/s41598–017–15802-x</mixed-citation></citation-alternatives></ref><ref id="cit33"><label>33</label><citation-alternatives><mixed-citation xml:lang="ru">Ericsson AC, Hagan CE, Davis DJ, Franklin CL. Segmented ﬁlamentous bacteria: commensal microbes with potential effects on research the immune. Comp Med. 2014; 64: 90–98.</mixed-citation><mixed-citation xml:lang="en">Ericsson AC, Hagan CE, Davis DJ, Franklin CL. Segmented ﬁlamentous bacteria: commensal microbes with potential effects on research the immune. Comp Med. 2014; 64: 90–98.</mixed-citation></citation-alternatives></ref><ref id="cit34"><label>34</label><citation-alternatives><mixed-citation xml:lang="ru">Willis VC, Demoruelle MK, Derber LA. Sputum autoantibodies in patients with established rheumatoid arthritis and subjects at risk of future clinically apparent disease. Arthritis Rheum. 2013; 65: 2545–2554. https://doi.org/10.1002/art.38066</mixed-citation><mixed-citation xml:lang="en">Willis VC, Demoruelle MK, Derber LA. Sputum autoantibodies in patients with established rheumatoid arthritis and subjects at risk of future clinically apparent disease. Arthritis Rheum. 2013; 65: 2545–2554. https://doi.org/10.1002/art.38066</mixed-citation></citation-alternatives></ref><ref id="cit35"><label>35</label><citation-alternatives><mixed-citation xml:lang="ru">Reynisdottir G, Karimi R, Joshua V et al. Structural changes and antibody enrichment in the lungs are early features of anti-citrullinated protein antibody-positive rheumatoid arthritis. Arthritis Rheumatol. 2014; 66 (1): 31–39. https://doi.org/10.1002/art.38201</mixed-citation><mixed-citation xml:lang="en">Reynisdottir G, Karimi R, Joshua V et al. Structural changes and antibody enrichment in the lungs are early features of anti-citrullinated protein antibody-positive rheumatoid arthritis. Arthritis Rheumatol. 2014; 66 (1): 31–39. https://doi.org/10.1002/art.38201</mixed-citation></citation-alternatives></ref><ref id="cit36"><label>36</label><citation-alternatives><mixed-citation xml:lang="ru">Hart JE, Kallberg H, Laden F et al. Ambient air pollution exposures and risk of rheumatoid arthritis: results from the Swedish EIRA case-control study. Ann Rheum Dis. 2013; 72 (6): 888–894. https://doi.org/10.1136/annrheumdis-2012–201587</mixed-citation><mixed-citation xml:lang="en">Hart JE, Kallberg H, Laden F et al. Ambient air pollution exposures and risk of rheumatoid arthritis: results from the Swedish EIRA case-control study. Ann Rheum Dis. 2013; 72 (6): 888–894. https://doi.org/10.1136/annrheumdis-2012–201587</mixed-citation></citation-alternatives></ref><ref id="cit37"><label>37</label><citation-alternatives><mixed-citation xml:lang="ru">Arnson Y, Shoenfeld Y, Amital H. Effects of tobacco smoke on immunity, inﬂammation and autoimmunity. J Autoimmun. 2010; 34 (3): 258–265. https://doi.org/10.1016/j.jaut.2009.12.003</mixed-citation><mixed-citation xml:lang="en">Arnson Y, Shoenfeld Y, Amital H. Effects of tobacco smoke on immunity, inﬂammation and autoimmunity. J Autoimmun. 2010; 34 (3): 258–265. https://doi.org/10.1016/j.jaut.2009.12.003</mixed-citation></citation-alternatives></ref><ref id="cit38"><label>38</label><citation-alternatives><mixed-citation xml:lang="ru">Catrina AI, Deane KD, Scher JU. Gene, environment, microbiome and mucosal immune tolerance in rheumatoid arthritis. Rheumatology (Oxford). 2016; 55 (3): 391–402. https://doi.org/10.1093/rheumatology/keu469</mixed-citation><mixed-citation xml:lang="en">Catrina AI, Deane KD, Scher JU. Gene, environment, microbiome and mucosal immune tolerance in rheumatoid arthritis. Rheumatology (Oxford). 2016; 55 (3): 391–402. https://doi.org/10.1093/rheumatology/keu469</mixed-citation></citation-alternatives></ref><ref id="cit39"><label>39</label><citation-alternatives><mixed-citation xml:lang="ru">Kronzer VL, Crowson CS, Sparks JA, Vassallo R, Davis JM 3rd. Investigating Asthma, Allergic Disease, Passive Smoke Exposure, and Risk of Rheumatoid Arthritis. Arthritis Rheumatol. 2019; 71 (8): 1217–1224. https://doi.org/10.1002/art.40858</mixed-citation><mixed-citation xml:lang="en">Kronzer VL, Crowson CS, Sparks JA, Vassallo R, Davis JM 3rd. Investigating Asthma, Allergic Disease, Passive Smoke Exposure, and Risk of Rheumatoid Arthritis. Arthritis Rheumatol. 2019; 71 (8): 1217–1224. https://doi.org/10.1002/art.40858</mixed-citation></citation-alternatives></ref><ref id="cit40"><label>40</label><citation-alternatives><mixed-citation xml:lang="ru">Balakrishnan B, Selvaraju V, Chen J, et al. Ethnic variability associating gut and oral microbiome with obesity in children. Gut Microbes. 2021; 13 (1): 1–15. https://doi.org/10.1080/19490976.2021.1882926</mixed-citation><mixed-citation xml:lang="en">Balakrishnan B, Selvaraju V, Chen J, et al. Ethnic variability associating gut and oral microbiome with obesity in children. Gut Microbes. 2021; 13 (1): 1–15. https://doi.org/10.1080/19490976.2021.1882926</mixed-citation></citation-alternatives></ref><ref id="cit41"><label>41</label><citation-alternatives><mixed-citation xml:lang="ru">Brandl C, Bucci L, Schett G, Zaiss MM (2021) Crossing the barriers: revisiting the gut feeling in rheumatoid arthritis. Eur J Immunol 51: 798–810.</mixed-citation><mixed-citation xml:lang="en">Brandl C, Bucci L, Schett G, Zaiss MM (2021) Crossing the barriers: revisiting the gut feeling in rheumatoid arthritis. Eur J Immunol 51: 798–810.</mixed-citation></citation-alternatives></ref><ref id="cit42"><label>42</label><citation-alternatives><mixed-citation xml:lang="ru">Park J, Kim M, Kang SG, et al. Short-chain fatty acids induce both effector and regulatory T cells by suppression of histone deacetylases and regulation of the mTOR-S6K pathway. Mucosal Immunol. 2015; 8 (1): 80–93. https://doi.org/10.1038/mi.2014.44</mixed-citation><mixed-citation xml:lang="en">Park J, Kim M, Kang SG, et al. Short-chain fatty acids induce both effector and regulatory T cells by suppression of histone deacetylases and regulation of the mTOR-S6K pathway. Mucosal Immunol. 2015; 8 (1): 80–93. https://doi.org/10.1038/mi.2014.44</mixed-citation></citation-alternatives></ref><ref id="cit43"><label>43</label><citation-alternatives><mixed-citation xml:lang="ru">Furusawa Y, Obata Y, Fukuda S, et al. Commensal microbe-derived butyrate induces the differentiation of colonic regulatory T cells [published correction appears in Nature. 2014 Feb 13; 506 (7487): 254]. Nature. 2013; 504 (7480): 446–450. https://doi.org/10.1038/nature12721</mixed-citation><mixed-citation xml:lang="en">Furusawa Y, Obata Y, Fukuda S, et al. Commensal microbe-derived butyrate induces the differentiation of colonic regulatory T cells [published correction appears in Nature. 2014 Feb 13; 506 (7487): 254]. Nature. 2013; 504 (7480): 446–450. https://doi.org/10.1038/nature12721</mixed-citation></citation-alternatives></ref><ref id="cit44"><label>44</label><citation-alternatives><mixed-citation xml:lang="ru">Gibson GR, Roberfroid MB. Dietary modulation of the human colonic microbiota: introducing the concept of prebiotics. J Nutr. 1995; 125 (6): 1401–1412. https://doi.org/10.1093/jn/125.6.1401</mixed-citation><mixed-citation xml:lang="en">Gibson GR, Roberfroid MB. Dietary modulation of the human colonic microbiota: introducing the concept of prebiotics. J Nutr. 1995; 125 (6): 1401–1412. https://doi.org/10.1093/jn/125.6.1401</mixed-citation></citation-alternatives></ref><ref id="cit45"><label>45</label><citation-alternatives><mixed-citation xml:lang="ru">Bindels LB, Delzenne NM, Cani PD, Walter J. Towards a more comprehensive concept for prebiotics. Nat Rev Gastroenterol Hepatol. 2015; 12 (5): 303–310. https://doi.org/10.1038/nrgastro.2015.47</mixed-citation><mixed-citation xml:lang="en">Bindels LB, Delzenne NM, Cani PD, Walter J. Towards a more comprehensive concept for prebiotics. Nat Rev Gastroenterol Hepatol. 2015; 12 (5): 303–310. https://doi.org/10.1038/nrgastro.2015.47</mixed-citation></citation-alternatives></ref><ref id="cit46"><label>46</label><citation-alternatives><mixed-citation xml:lang="ru">Dourado E, Ferro M, Sousa Guerreiro C, Fonseca JE. Diet as a Modulator of Intestinal Microbiota in Rheumatoid Arthritis. Nutrients. 2020; 12 (11): 3504. https://doi.org/10.3390/nu12113504</mixed-citation><mixed-citation xml:lang="en">Dourado E, Ferro M, Sousa Guerreiro C, Fonseca JE. Diet as a Modulator of Intestinal Microbiota in Rheumatoid Arthritis. Nutrients. 2020; 12 (11): 3504. https://doi.org/10.3390/nu12113504</mixed-citation></citation-alternatives></ref><ref id="cit47"><label>47</label><citation-alternatives><mixed-citation xml:lang="ru">De Filippis F, Pasolli E, Tett A, et al. Distinct Genetic and Functional Traits of Human Intestinal Prevotella copri Strains Are Associated with Different Habitual Diets. Cell Host Microbe. 2019; 25 (3): 444–453. e3. https://doi.org/10.1016/j.chom.2019.01.004</mixed-citation><mixed-citation xml:lang="en">De Filippis F, Pasolli E, Tett A, et al. Distinct Genetic and Functional Traits of Human Intestinal Prevotella copri Strains Are Associated with Different Habitual Diets. Cell Host Microbe. 2019; 25 (3): 444–453. e3. https://doi.org/10.1016/j.chom.2019.01.004</mixed-citation></citation-alternatives></ref><ref id="cit48"><label>48</label><citation-alternatives><mixed-citation xml:lang="ru">Gálvez EJC, Iljazovic A, Amend L, et al. Distinct Polysaccharide Utilization Determines Interspecies Competition between Intestinal Prevotella spp. Cell Host Microbe. 2020; 28 (6): 838–852. e6. https://doi.org/10.1016/j.chom.2020.09.012</mixed-citation><mixed-citation xml:lang="en">Gálvez EJC, Iljazovic A, Amend L, et al. Distinct Polysaccharide Utilization Determines Interspecies Competition between Intestinal Prevotella spp. Cell Host Microbe. 2020; 28 (6): 838–852. e6. https://doi.org/10.1016/j.chom.2020.09.012</mixed-citation></citation-alternatives></ref><ref id="cit49"><label>49</label><citation-alternatives><mixed-citation xml:lang="ru">Zhao Y, Wu J, Li JV, Zhou NY, Tang H, Wang Y. Gut microbiota composition modiﬁes fecal metabolic proﬁles in mice. J Proteome Res. 2013; 12 (6): 2987–2999. https://doi.org/10.1021/pr400263n</mixed-citation><mixed-citation xml:lang="en">Zhao Y, Wu J, Li JV, Zhou NY, Tang H, Wang Y. Gut microbiota composition modiﬁes fecal metabolic proﬁles in mice. J Proteome Res. 2013; 12 (6): 2987–2999. https://doi.org/10.1021/pr400263n</mixed-citation></citation-alternatives></ref><ref id="cit50"><label>50</label><citation-alternatives><mixed-citation xml:lang="ru">Weingarden A, González A, Vázquez-Baeza Y, et al. Dynamic changes in short- and long-term bacterial composition following fecal microbiota transplantation for recurrent Clostridium difﬁcile infection. Microbiome. 2015; 3: 10. https://doi.org/10.1186/s40168–015–0070–0.</mixed-citation><mixed-citation xml:lang="en">Weingarden A, González A, Vázquez-Baeza Y, et al. Dynamic changes in short- and long-term bacterial composition following fecal microbiota transplantation for recurrent Clostridium difﬁcile infection. Microbiome. 2015; 3: 10. https://doi.org/10.1186/s40168–015–0070–0.</mixed-citation></citation-alternatives></ref><ref id="cit51"><label>51</label><citation-alternatives><mixed-citation xml:lang="ru">Xu MQ, Cao HL, Wang WQ, et al. Fecal microbiota transplantation broadening its application beyond intestinal disorders. World J Gastroenterol. 2015; 21 (1): 102–111. https://doi.org/10.3748/wjg.v21.i1.102</mixed-citation><mixed-citation xml:lang="en">Xu MQ, Cao HL, Wang WQ, et al. Fecal microbiota transplantation broadening its application beyond intestinal disorders. World J Gastroenterol. 2015; 21 (1): 102–111. https://doi.org/10.3748/wjg.v21.i1.102</mixed-citation></citation-alternatives></ref><ref id="cit52"><label>52</label><citation-alternatives><mixed-citation xml:lang="ru">Lee CH, Steiner T, Petrof EO, et al. Frozen vs Fresh Fecal Microbiota Transplantation and Clinical Resolution of Diarrhea in Patients with Recurrent Clostridium difﬁcile Infection: A Randomized Clinical Trial. JAMA. 2016; 315 (2): 142–149. https://doi.org/10.1001/jama.2015.18098</mixed-citation><mixed-citation xml:lang="en">Lee CH, Steiner T, Petrof EO, et al. Frozen vs Fresh Fecal Microbiota Transplantation and Clinical Resolution of Diarrhea in Patients with Recurrent Clostridium difﬁcile Infection: A Randomized Clinical Trial. JAMA. 2016; 315 (2): 142–149. https://doi.org/10.1001/jama.2015.18098</mixed-citation></citation-alternatives></ref><ref id="cit53"><label>53</label><citation-alternatives><mixed-citation xml:lang="ru">Zeng J, Peng L, Zheng W, et al. Fecal microbiota transplantation for rheumatoid arthritis: A case report. Clin Case Rep. 2020; 9 (2): 906–909. https://doi.org/10.1002/ccr3.3677</mixed-citation><mixed-citation xml:lang="en">Zeng J, Peng L, Zheng W, et al. Fecal microbiota transplantation for rheumatoid arthritis: A case report. Clin Case Rep. 2020; 9 (2): 906–909. https://doi.org/10.1002/ccr3.3677</mixed-citation></citation-alternatives></ref><ref id="cit54"><label>54</label><citation-alternatives><mixed-citation xml:lang="ru">de Oliveira GLV, Leite AZ, Higuchi BS, Gonzaga MI, Mariano VS. Intestinal dysbiosis and probiotic applications in autoimmune diseases. Immunology. 2017; 152 (1): 1–12. https://doi.org/10.1111/imm.12765</mixed-citation><mixed-citation xml:lang="en">de Oliveira GLV, Leite AZ, Higuchi BS, Gonzaga MI, Mariano VS. Intestinal dysbiosis and probiotic applications in autoimmune diseases. Immunology. 2017; 152 (1): 1–12. https://doi.org/10.1111/imm.12765</mixed-citation></citation-alternatives></ref><ref id="cit55"><label>55</label><citation-alternatives><mixed-citation xml:lang="ru">Pineda MD, Thompson SF, Summers K, De Leon F, Pope J, Reid G. A randomized, double-blinded, placebo-controlled pilot study of probiotics in active rheumatoid arthritis. Med Sci Monit 17: CR347–CR354.</mixed-citation><mixed-citation xml:lang="en">Pineda MD, Thompson SF, Summers K, De Leon F, Pope J, Reid G. A randomized, double-blinded, placebo-controlled pilot study of probiotics in active rheumatoid arthritis. Med Sci Monit 17: CR347–CR354.</mixed-citation></citation-alternatives></ref><ref id="cit56"><label>56</label><citation-alternatives><mixed-citation xml:lang="ru">Hatakka K, Martio J, Korpela M, et al. Effects of probiotic therapy on the activity and activation of mild rheumatoid arthritis – a pilot study. Scand J Rheumatol. 2003; 32 (4): 211–215. https://doi.org/10.1080/03009740310003695</mixed-citation><mixed-citation xml:lang="en">Hatakka K, Martio J, Korpela M, et al. Effects of probiotic therapy on the activity and activation of mild rheumatoid arthritis – a pilot study. Scand J Rheumatol. 2003; 32 (4): 211–215. https://doi.org/10.1080/03009740310003695</mixed-citation></citation-alternatives></ref><ref id="cit57"><label>57</label><citation-alternatives><mixed-citation xml:lang="ru">Vaghef-Mehrabany E, Alipour B, Homayouni-Rad A, Sharif SK, Asghari-Jafarabadi M, Zavvari S. Probiotic supplementation improves inﬂammatory status in patients with rheumatoid arthritis. Nutrition. 2014; 30 (4): 430–435. https://doi.org/10.1016/j.nut.2013.09.007</mixed-citation><mixed-citation xml:lang="en">Vaghef-Mehrabany E, Alipour B, Homayouni-Rad A, Sharif SK, Asghari-Jafarabadi M, Zavvari S. Probiotic supplementation improves inﬂammatory status in patients with rheumatoid arthritis. Nutrition. 2014; 30 (4): 430–435. https://doi.org/10.1016/j.nut.2013.09.007</mixed-citation></citation-alternatives></ref><ref id="cit58"><label>58</label><citation-alternatives><mixed-citation xml:lang="ru">Zamani B, Golkar HR, Farshbaf S, et al. Clinical and metabolic response to probiotic supplementation in patients with rheumatoid arthritis: A randomized, double-blind, placebo-controlled trial. Int J Rheum Dis. 2016; 19 (9): 869–879. https://doi.org/10.1111/1756–185X.12888</mixed-citation><mixed-citation xml:lang="en">Zamani B, Golkar HR, Farshbaf S, et al. Clinical and metabolic response to probiotic supplementation in patients with rheumatoid arthritis: A randomized, double-blind, placebo-controlled trial. Int J Rheum Dis. 2016; 19 (9): 869–879. https://doi.org/10.1111/1756–185X.12888</mixed-citation></citation-alternatives></ref><ref id="cit59"><label>59</label><citation-alternatives><mixed-citation xml:lang="ru">Alipour B, Homayouni-Rad A, Vaghef-Mehrabany E, et al. Effects of Lactobacillus casei supplementation on disease activity and inﬂammatory cytokines in rheumatoid arthritis patients: A randomized double-blind clinical trial. Int J Rheum Dis. 2014; 17 (5): 519–527. https://doi.org/10.1111/1756–185X.12333</mixed-citation><mixed-citation xml:lang="en">Alipour B, Homayouni-Rad A, Vaghef-Mehrabany E, et al. Effects of Lactobacillus casei supplementation on disease activity and inﬂammatory cytokines in rheumatoid arthritis patients: A randomized double-blind clinical trial. Int J Rheum Dis. 2014; 17 (5): 519–527. https://doi.org/10.1111/1756–185X.12333</mixed-citation></citation-alternatives></ref><ref id="cit60"><label>60</label><citation-alternatives><mixed-citation xml:lang="ru">Ferro M, Charneca S, Dourado E, Guerreiro CS, Fonseca JE. Probiotic Supplementation for Rheumatoid Arthritis: A Promising Adjuvant Therapy in the Gut Microbiome Era. Front Pharmacol. 2021; 12: 711788. https://doi.org/10.3389/fphar.2021.711788</mixed-citation><mixed-citation xml:lang="en">Ferro M, Charneca S, Dourado E, Guerreiro CS, Fonseca JE. Probiotic Supplementation for Rheumatoid Arthritis: A Promising Adjuvant Therapy in the Gut Microbiome Era. Front Pharmacol. 2021; 12: 711788. https://doi.org/10.3389/fphar.2021.711788</mixed-citation></citation-alternatives></ref><ref id="cit61"><label>61</label><citation-alternatives><mixed-citation xml:lang="ru">Mandel DR, Eichas K, Holmes J. Bacillus coagulans: A viable adjunct therapy for relieving symptoms of rheumatoid arthritis according to a randomized, controlled trial. BMC Complement Altern Med. 2010; 10: 1. https://doi.org/10.1186/1472–6882–10–1</mixed-citation><mixed-citation xml:lang="en">Mandel DR, Eichas K, Holmes J. Bacillus coagulans: A viable adjunct therapy for relieving symptoms of rheumatoid arthritis according to a randomized, controlled trial. BMC Complement Altern Med. 2010; 10: 1. https://doi.org/10.1186/1472–6882–10–1</mixed-citation></citation-alternatives></ref><ref id="cit62"><label>62</label><citation-alternatives><mixed-citation xml:lang="ru">Tannock GW, Munro K, Harmsen HJ, Welling GW, Smart J, Gopal PK. Analysis of the fecal microﬂora of human subjects consuming a probiotic product containing Lactobacillus rhamnosus DR20. Appl Environ Microbiol. 2000; 66 (6): 2578–2588. https://doi.org/10.1128/AEM.66.6.2578–2588.2000</mixed-citation><mixed-citation xml:lang="en">Tannock GW, Munro K, Harmsen HJ, Welling GW, Smart J, Gopal PK. Analysis of the fecal microﬂora of human subjects consuming a probiotic product containing Lactobacillus rhamnosus DR20. Appl Environ Microbiol. 2000; 66 (6): 2578–2588. https://doi.org/10.1128/AEM.66.6.2578–2588.2000</mixed-citation></citation-alternatives></ref><ref id="cit63"><label>63</label><citation-alternatives><mixed-citation xml:lang="ru">Steidler L, Hans W, Schotte L, et al. Treatment of murine colitis by Lactococcus lactis secreting interleukin-10. Science. 2000; 289 (5483): 1352–1355. https://doi.org/10.1126/science.289.5483.1352</mixed-citation><mixed-citation xml:lang="en">Steidler L, Hans W, Schotte L, et al. Treatment of murine colitis by Lactococcus lactis secreting interleukin-10. Science. 2000; 289 (5483): 1352–1355. https://doi.org/10.1126/science.289.5483.1352</mixed-citation></citation-alternatives></ref><ref id="cit64"><label>64</label><citation-alternatives><mixed-citation xml:lang="ru">Robert S, Steidler L. Recombinant Lactococcus lactis can make the difference in antigen-speciﬁc immune tolerance induction, the Type 1 Diabetes case. Microb Cell Fact. 2014; 13 Suppl 1 (Suppl 1): S11. https://doi.org/10.1186/1475–2859–13-S1-S11</mixed-citation><mixed-citation xml:lang="en">Robert S, Steidler L. Recombinant Lactococcus lactis can make the difference in antigen-speciﬁc immune tolerance induction, the Type 1 Diabetes case. Microb Cell Fact. 2014; 13 Suppl 1 (Suppl 1): S11. https://doi.org/10.1186/1475–2859–13-S1-S11</mixed-citation></citation-alternatives></ref><ref id="cit65"><label>65</label><citation-alternatives><mixed-citation xml:lang="ru">Farrar MD, Whitehead TR, Lan J, et al. Engineering of the gut commensal bacterium Bacteroides ovatus to produce and secrete biologically active murine interleukin-2 in response to xylan. J Appl Microbiol. 2005; 98 (5): 1191–1197. https://doi.org/10.1111/j.1365–2672.2005.02565.x</mixed-citation><mixed-citation xml:lang="en">Farrar MD, Whitehead TR, Lan J, et al. Engineering of the gut commensal bacterium Bacteroides ovatus to produce and secrete biologically active murine interleukin-2 in response to xylan. J Appl Microbiol. 2005; 98 (5): 1191–1197. https://doi.org/10.1111/j.1365–2672.2005.02565.x</mixed-citation></citation-alternatives></ref><ref id="cit66"><label>66</label><citation-alternatives><mixed-citation xml:lang="ru">Hamady ZZ, Scott N, Farrar MD, et al. Treatment of colitis with a commensal gut bacterium engineered to secrete human TGF-β1 under the control of dietary xylan 1. Inﬂamm Bowel Dis. 2011; 17 (9): 1925–1935. https://doi.org/10.1002/ibd.21565</mixed-citation><mixed-citation xml:lang="en">Hamady ZZ, Scott N, Farrar MD, et al. Treatment of colitis with a commensal gut bacterium engineered to secrete human TGF-β1 under the control of dietary xylan 1. Inﬂamm Bowel Dis. 2011; 17 (9): 1925–1935. https://doi.org/10.1002/ibd.21565</mixed-citation></citation-alternatives></ref><ref id="cit67"><label>67</label><citation-alternatives><mixed-citation xml:lang="ru">Maier E, Anderson RC, Roy NC (2015) Understanding how commensal obligate anaerobic bacteria regulate immune functions in the large intestine. Nutrients 7: 45–73.</mixed-citation><mixed-citation xml:lang="en">Maier E, Anderson RC, Roy NC (2015) Understanding how commensal obligate anaerobic bacteria regulate immune functions in the large intestine. Nutrients 7: 45–73.</mixed-citation></citation-alternatives></ref><ref id="cit68"><label>68</label><citation-alternatives><mixed-citation xml:lang="ru">Shi N, Zhang SY, Silverman G, Li MT, Cai J, Niu HT. Protective effect of hydroxychloroquine on rheumatoid arthritis-associated atherosclerosis. Animal Mod Exp Med 2: 98–106.</mixed-citation><mixed-citation xml:lang="en">Shi N, Zhang SY, Silverman G, Li MT, Cai J, Niu HT. Protective effect of hydroxychloroquine on rheumatoid arthritis-associated atherosclerosis. Animal Mod Exp Med 2: 98–106.</mixed-citation></citation-alternatives></ref><ref id="cit69"><label>69</label><citation-alternatives><mixed-citation xml:lang="ru">Everard A, Belzer C, Geurts L, et al. Cross-talk between Akkermansia muciniphila and intestinal epithelium controls diet-induced obesity. Proc Natl Acad Sci USA. 2013; 110 (22): 9066–9071. https://doi.org/10.1073/pnas.1219451110</mixed-citation><mixed-citation xml:lang="en">Everard A, Belzer C, Geurts L, et al. Cross-talk between Akkermansia muciniphila and intestinal epithelium controls diet-induced obesity. Proc Natl Acad Sci USA. 2013; 110 (22): 9066–9071. https://doi.org/10.1073/pnas.1219451110</mixed-citation></citation-alternatives></ref><ref id="cit70"><label>70</label><citation-alternatives><mixed-citation xml:lang="ru">Derrien M, Belzer C, de Vos WM. Akkermansia muciniphila and its role in regulating host functions. Microb Pathog. 2017; 106: 171–181. https://doi.org/10.1016/j.micpath.2016.02.005</mixed-citation><mixed-citation xml:lang="en">Derrien M, Belzer C, de Vos WM. Akkermansia muciniphila and its role in regulating host functions. Microb Pathog. 2017; 106: 171–181. https://doi.org/10.1016/j.micpath.2016.02.005</mixed-citation></citation-alternatives></ref><ref id="cit71"><label>71</label><citation-alternatives><mixed-citation xml:lang="ru">Hänninen A, Toivonen R, Pöysti S, et al. Akkermansia muciniphila induces gut microbiota remodelling and controls islet autoimmunity in NOD mice. Gut. 2018; 67 (8): 1445–1453. https://doi.org/10.1136/gutjnl-2017–314508</mixed-citation><mixed-citation xml:lang="en">Hänninen A, Toivonen R, Pöysti S, et al. Akkermansia muciniphila induces gut microbiota remodelling and controls islet autoimmunity in NOD mice. Gut. 2018; 67 (8): 1445–1453. https://doi.org/10.1136/gutjnl-2017–314508</mixed-citation></citation-alternatives></ref><ref id="cit72"><label>72</label><citation-alternatives><mixed-citation xml:lang="ru">Mccarville JL, Caminero A, Verdu EF (2016) Novel perspectives on therapeutic modulation of the gut microbiota. Ther Adv Gastroenterol 9: 580–593.</mixed-citation><mixed-citation xml:lang="en">Mccarville JL, Caminero A, Verdu EF (2016) Novel perspectives on therapeutic modulation of the gut microbiota. Ther Adv Gastroenterol 9: 580–593.</mixed-citation></citation-alternatives></ref><ref id="cit73"><label>73</label><citation-alternatives><mixed-citation xml:lang="ru">Depommier C, Everard A, Druart C, et al. Supplementation with Akkermansia muciniphila in overweight and obese human volunteers: a proof-of-concept exploratory study. Nat Med. 2019; 25 (7): 1096–1103. https://doi.org/10.1038/s41591–019–0495–2</mixed-citation><mixed-citation xml:lang="en">Depommier C, Everard A, Druart C, et al. Supplementation with Akkermansia muciniphila in overweight and obese human volunteers: a proof-of-concept exploratory study. Nat Med. 2019; 25 (7): 1096–1103. https://doi.org/10.1038/s41591–019–0495–2</mixed-citation></citation-alternatives></ref><ref id="cit74"><label>74</label><citation-alternatives><mixed-citation xml:lang="ru">Gomez-Gallego C, Pohl S, Salminen S, De Vos WM, Kneifel W. Akkermansia muciniphila: a novel functional microbe with probiotic properties. Beneﬁc Microbes 7: 571–584.</mixed-citation><mixed-citation xml:lang="en">Gomez-Gallego C, Pohl S, Salminen S, De Vos WM, Kneifel W. Akkermansia muciniphila: a novel functional microbe with probiotic properties. Beneﬁc Microbes 7: 571–584.</mixed-citation></citation-alternatives></ref><ref id="cit75"><label>75</label><citation-alternatives><mixed-citation xml:lang="ru">Sayers E, MacGregor A, Carding SR. Drug-microbiota interactions and treatment response: Relevance to rheumatoid arthritis. AIMS Microbiol. 2018; 4 (4): 642–654. https://doi.org/10.3934/microbiol.2018.4.642</mixed-citation><mixed-citation xml:lang="en">Sayers E, MacGregor A, Carding SR. Drug-microbiota interactions and treatment response: Relevance to rheumatoid arthritis. AIMS Microbiol. 2018; 4 (4): 642–654. https://doi.org/10.3934/microbiol.2018.4.642</mixed-citation></citation-alternatives></ref><ref id="cit76"><label>76</label><citation-alternatives><mixed-citation xml:lang="ru">Martin R, Miquel S, Benevides L, Bridonneau C, Robert V, Hudault S, Chain F, Berteau O, Azevedo V, Chatel JM, Sokol H, Bermudez-Humaran LG, Thomas M, Langella P (2017) Functional characterization of novel Faecalibacterium prausnitzii strains isolated from healthy volunteers: a step forward in the use of F. prausnitzii as a next-generation probiotic. Front Microbiol 8: 226.</mixed-citation><mixed-citation xml:lang="en">Martin R, Miquel S, Benevides L, Bridonneau C, Robert V, Hudault S, Chain F, Berteau O, Azevedo V, Chatel JM, Sokol H, Bermudez-Humaran LG, Thomas M, Langella P (2017) Functional characterization of novel Faecalibacterium prausnitzii strains isolated from healthy volunteers: a step forward in the use of F. prausnitzii as a next-generation probiotic. Front Microbiol 8: 226.</mixed-citation></citation-alternatives></ref><ref id="cit77"><label>77</label><citation-alternatives><mixed-citation xml:lang="ru">Rossi O, van Berkel LA, Chain F, et al. Faecalibacterium prausnitzii A2–165 has a high capacity to induce IL-10 in human and murine dendritic cells and modulates T cell responses. Sci Rep. 2016; 6: 18507. https://doi.org/10.1038/srep18507</mixed-citation><mixed-citation xml:lang="en">Rossi O, van Berkel LA, Chain F, et al. Faecalibacterium prausnitzii A2–165 has a high capacity to induce IL-10 in human and murine dendritic cells and modulates T cell responses. Sci Rep. 2016; 6: 18507. https://doi.org/10.1038/srep18507</mixed-citation></citation-alternatives></ref><ref id="cit78"><label>78</label><citation-alternatives><mixed-citation xml:lang="ru">Zou F, Qiu Y, Huang Y, et al. Effects of short-chain fatty acids in inhibiting HDAC and activating p38 MAPK are critical for promoting B10 cell generation and function. Cell Death Dis. 2021; 12 (6): 582. https://doi.org/10.1038/s41419–021–03880–9</mixed-citation><mixed-citation xml:lang="en">Zou F, Qiu Y, Huang Y, et al. Effects of short-chain fatty acids in inhibiting HDAC and activating p38 MAPK are critical for promoting B10 cell generation and function. Cell Death Dis. 2021; 12 (6): 582. https://doi.org/10.1038/s41419–021–03880–9</mixed-citation></citation-alternatives></ref><ref id="cit79"><label>79</label><citation-alternatives><mixed-citation xml:lang="ru">Zhang JB, Huang YJ, Yoon JY, Kemmitt J, Wright C, Schneider K, Sphabmixay P, Hernandez-Gordillo V, Holcomb SJ, Bhushan B, Rohatgi G, Benton K, Carpenter D, Kester JC, Eng G, Breault DT, Yilmaz O, Taketani M, Voigt CA, Carrier RL, Trumper DL, Grifﬁth LG. Primary human colonic mucosal barrier crosstalk with super oxygen-sensitive Faecalibacterium prausnitzii in continuous culture. Med (NY) 2: 74–98. e9.</mixed-citation><mixed-citation xml:lang="en">Zhang JB, Huang YJ, Yoon JY, Kemmitt J, Wright C, Schneider K, Sphabmixay P, Hernandez-Gordillo V, Holcomb SJ, Bhushan B, Rohatgi G, Benton K, Carpenter D, Kester JC, Eng G, Breault DT, Yilmaz O, Taketani M, Voigt CA, Carrier RL, Trumper DL, Grifﬁth LG. Primary human colonic mucosal barrier crosstalk with super oxygen-sensitive Faecalibacterium prausnitzii in continuous culture. Med (NY) 2: 74–98. e9.</mixed-citation></citation-alternatives></ref><ref id="cit80"><label>80</label><citation-alternatives><mixed-citation xml:lang="ru">He XY, Zhao SY, Li Y Faecalibacterium prausnitzii: A next-generation probiotic in gut disease improvement. Can J Infect Dis Med Microbiol 2021: 6666114.</mixed-citation><mixed-citation xml:lang="en">He XY, Zhao SY, Li Y Faecalibacterium prausnitzii: A next-generation probiotic in gut disease improvement. Can J Infect Dis Med Microbiol 2021: 6666114.</mixed-citation></citation-alternatives></ref><ref id="cit81"><label>81</label><citation-alternatives><mixed-citation xml:lang="ru">Pianta A, Arvikar S, Strle K, et al. Evidence of the Immune Relevance of Prevotella copri, a Gut Microbe, in Patients with Rheumatoid Arthritis. Arthritis Rheumatol. 2017; 69 (5): 964–975. https://doi.org/10.1002/art.40003</mixed-citation><mixed-citation xml:lang="en">Pianta A, Arvikar S, Strle K, et al. Evidence of the Immune Relevance of Prevotella copri, a Gut Microbe, in Patients with Rheumatoid Arthritis. Arthritis Rheumatol. 2017; 69 (5): 964–975. https://doi.org/10.1002/art.40003</mixed-citation></citation-alternatives></ref><ref id="cit82"><label>82</label><citation-alternatives><mixed-citation xml:lang="ru">Artacho A, Isaac S, Nayak R, et al. The Pretreatment Gut Microbiome Is Associated with Lack of Response to Methotrexate in New-Onset Rheumatoid Arthritis. Arthritis Rheumatol. 2021; 73 (6): 931–942. https://doi.org/10.1002/art.41622</mixed-citation><mixed-citation xml:lang="en">Artacho A, Isaac S, Nayak R, et al. The Pretreatment Gut Microbiome Is Associated with Lack of Response to Methotrexate in New-Onset Rheumatoid Arthritis. Arthritis Rheumatol. 2021; 73 (6): 931–942. https://doi.org/10.1002/art.41622</mixed-citation></citation-alternatives></ref><ref id="cit83"><label>83</label><citation-alternatives><mixed-citation xml:lang="ru">Gupta VK, Cunningham KY, Hur B, et al. Gut microbial determinants of clinically important improvement in patients with rheumatoid arthritis. Genome Med. 2021; 13 (1): 149. https://doi.org/10.1186/s13073–021–00957–0</mixed-citation><mixed-citation xml:lang="en">Gupta VK, Cunningham KY, Hur B, et al. Gut microbial determinants of clinically important improvement in patients with rheumatoid arthritis. Genome Med. 2021; 13 (1): 149. https://doi.org/10.1186/s13073–021–00957–0</mixed-citation></citation-alternatives></ref></ref-list><fn-group><fn fn-type="conflict"><p>The authors declare that there are no conflicts of interest present.</p></fn></fn-group></back></article>
